Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdx2P43241 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Cdx2P43241 Gm8018-201ENSMUST00000173536 789 ntBASIC12.23□□□□□ -0.45
Cdx2P43241 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdx2P43241 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Cdx2P43241 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdx2P43241 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdx2P43241 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdx2P43241 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdx2P43241 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdx2P43241 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Gm14921-201ENSMUST00000118643 908 ntBASIC12.22□□□□□ -0.45
Cdx2P43241 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Gm5070-201ENSMUST00000177599 862 ntBASIC12.22□□□□□ -0.45
Cdx2P43241 Rprl1-202ENSMUST00000198476 238 ntBASIC12.22□□□□□ -0.45
Cdx2P43241 Gm44100-201ENSMUST00000204329 436 ntBASIC12.22□□□□□ -0.45
Cdx2P43241 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.22□□□□□ -0.45
Cdx2P43241 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Cdx2P43241 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.22□□□□□ -0.45
Cdx2P43241 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdx2P43241 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdx2P43241 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx2P43241 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.22□□□□□ -0.45
Cdx2P43241 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.21□□□□□ -0.45
Cdx2P43241 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.21□□□□□ -0.45
Cdx2P43241 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.21□□□□□ -0.45
Cdx2P43241 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdx2P43241 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdx2P43241 Gm14999-201ENSMUST00000121039 624 ntBASIC12.21□□□□□ -0.45
Cdx2P43241 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.21□□□□□ -0.45
Cdx2P43241 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.21□□□□□ -0.45
Cdx2P43241 Gm24749-201ENSMUST00000157838 343 ntBASIC12.21□□□□□ -0.45
Cdx2P43241 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.21□□□□□ -0.45
Cdx2P43241 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdx2P43241 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.21□□□□□ -0.45
Cdx2P43241 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.21□□□□□ -0.45
Cdx2P43241 Gm7003-201ENSMUST00000195089 312 ntBASIC12.21□□□□□ -0.45
Cdx2P43241 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.21□□□□□ -0.45
Cdx2P43241 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms