Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-2P42586 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx2-2P42586 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.82□□□□□ -0.52
Nkx2-2P42586 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.82□□□□□ -0.52
Nkx2-2P42586 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.82□□□□□ -0.52
Nkx2-2P42586 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.82□□□□□ -0.52
Nkx2-2P42586 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Gm10268-201ENSMUST00000085340 555 ntBASIC11.82□□□□□ -0.52
Nkx2-2P42586 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.82□□□□□ -0.52
Nkx2-2P42586 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-2P42586 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.81□□□□□ -0.52
Nkx2-2P42586 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.81□□□□□ -0.52
Nkx2-2P42586 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Gm1335-201ENSMUST00000121653 386 ntBASIC11.81□□□□□ -0.52
Nkx2-2P42586 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.81□□□□□ -0.52
Nkx2-2P42586 Gm6266-201ENSMUST00000203844 806 ntBASIC11.81□□□□□ -0.52
Nkx2-2P42586 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.81□□□□□ -0.52
Nkx2-2P42586 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.81□□□□□ -0.52
Nkx2-2P42586 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx2-2P42586 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.8□□□□□ -0.52
Nkx2-2P42586 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.8□□□□□ -0.52
Nkx2-2P42586 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Nkx2-2P42586 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms