Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sox6P40645 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox6P40645 Matn2-203ENSMUST00000226766 3252 ntBASIC12.13□□□□□ -0.47
Sox6P40645 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.13□□□□□ -0.47
Sox6P40645 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.13□□□□□ -0.47
Sox6P40645 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.13□□□□□ -0.47
Sox6P40645 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.13□□□□□ -0.47
Sox6P40645 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.13□□□□□ -0.47
Sox6P40645 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.13□□□□□ -0.47
Sox6P40645 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sox6P40645 Gm17330-201ENSMUST00000221047 165 ntBASIC12.13□□□□□ -0.47
Sox6P40645 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.13□□□□□ -0.47
Sox6P40645 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Gm5161-201ENSMUST00000075243 853 ntBASIC12.13□□□□□ -0.47
Sox6P40645 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sox6P40645 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sox6P40645 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sox6P40645 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sox6P40645 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.13□□□□□ -0.47
Sox6P40645 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox6P40645 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox6P40645 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.12□□□□□ -0.47
Sox6P40645 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox6P40645 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sox6P40645 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox6P40645 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox6P40645 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.12□□□□□ -0.47
Sox6P40645 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox6P40645 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox6P40645 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox6P40645 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox6P40645 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.12□□□□□ -0.47
Sox6P40645 Gm8515-201ENSMUST00000194852 576 ntBASIC12.12□□□□□ -0.47
Sox6P40645 Gm18018-201ENSMUST00000198273 408 ntBASIC12.12□□□□□ -0.47
Sox6P40645 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.12□□□□□ -0.47
Sox6P40645 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.12□□□□□ -0.47
Sox6P40645 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Sox6P40645 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Gm24447-201ENSMUST00000083977 338 ntBASIC12.12□□□□□ -0.47
Sox6P40645 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sox6P40645 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sox6P40645 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox6P40645 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox6P40645 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sox6P40645 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sox6P40645 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sox6P40645 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sox6P40645 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Sox6P40645 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms