Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TfamP40630 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Gm14350-201ENSMUST00000116642 640 ntBASIC12.5□□□□□ -0.41
TfamP40630 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Gm11978-201ENSMUST00000122315 466 ntBASIC12.5□□□□□ -0.41
TfamP40630 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
TfamP40630 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.5□□□□□ -0.41
TfamP40630 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TfamP40630 Gm27437-201ENSMUST00000183429 107 ntBASIC12.5□□□□□ -0.41
TfamP40630 Mir6977-201ENSMUST00000184960 64 ntBASIC12.5□□□□□ -0.41
TfamP40630 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.5□□□□□ -0.41
TfamP40630 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.5□□□□□ -0.41
TfamP40630 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
TfamP40630 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.5□□□□□ -0.41
TfamP40630 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TfamP40630 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TfamP40630 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TfamP40630 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TfamP40630 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TfamP40630 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TfamP40630 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.49□□□□□ -0.41
TfamP40630 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TfamP40630 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.49□□□□□ -0.41
TfamP40630 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.49□□□□□ -0.41
TfamP40630 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.49□□□□□ -0.41
TfamP40630 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TfamP40630 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.49□□□□□ -0.41
TfamP40630 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Gm16202-201ENSMUST00000117532 544 ntBASIC12.49□□□□□ -0.41
TfamP40630 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.49□□□□□ -0.41
TfamP40630 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.49□□□□□ -0.41
TfamP40630 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.49□□□□□ -0.41
TfamP40630 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.49□□□□□ -0.41
TfamP40630 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
TfamP40630 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
TfamP40630 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.49□□□□□ -0.41
TfamP40630 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TfamP40630 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TfamP40630 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TfamP40630 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TfamP40630 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TfamP40630 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TfamP40630 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TfamP40630 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TfamP40630 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TfamP40630 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TfamP40630 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TfamP40630 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.48□□□□□ -0.41
TfamP40630 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TfamP40630 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.48□□□□□ -0.41
TfamP40630 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TfamP40630 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TfamP40630 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms