Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC18.88■□□□□ 0.61
Chd1P40201 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd1P40201 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd1P40201 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd1P40201 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd1P40201 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd1P40201 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Chd1P40201 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd1P40201 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Chd1P40201 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd1P40201 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Chd1P40201 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Chd1P40201 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Chd1P40201 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Chd1P40201 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Chd1P40201 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Gm5555-201ENSMUST00000120352 1111 ntBASIC18.87■□□□□ 0.61
Chd1P40201 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC18.87■□□□□ 0.61
Chd1P40201 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Chd1P40201 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Chd1P40201 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC18.87■□□□□ 0.61
Chd1P40201 Gm18514-201ENSMUST00000218980 436 ntBASIC18.87■□□□□ 0.61
Chd1P40201 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC18.87■□□□□ 0.61
Chd1P40201 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC18.87■□□□□ 0.61
Chd1P40201 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.87■□□□□ 0.61
Chd1P40201 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Chd1P40201 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC18.87■□□□□ 0.61
Chd1P40201 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd1P40201 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Chd1P40201 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chd1P40201 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 AC173482.6-201ENSMUST00000225889 1741 ntBASIC18.86■□□□□ 0.61
Chd1P40201 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Chd1P40201 Gm13351-201ENSMUST00000118087 414 ntBASIC18.86■□□□□ 0.61
Chd1P40201 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC18.86■□□□□ 0.61
Chd1P40201 Gm18776-201ENSMUST00000188833 654 ntBASIC18.86■□□□□ 0.61
Chd1P40201 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Arhgef33-210ENSMUST00000225548 456 ntBASIC18.86■□□□□ 0.61
Chd1P40201 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Chd1P40201 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chd1P40201 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Gm8617-201ENSMUST00000118796 2222 ntBASIC18.86■□□□□ 0.61
Chd1P40201 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Gm43045-201ENSMUST00000198725 2095 ntBASIC18.86■□□□□ 0.61
Chd1P40201 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Chd1P40201 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd1P40201 AC165154.1-201ENSMUST00000226661 340 ntBASIC18.86■□□□□ 0.61
Chd1P40201 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC18.85■□□□□ 0.61
Chd1P40201 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chd1P40201 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC18.85■□□□□ 0.61
Chd1P40201 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC18.85■□□□□ 0.61
Chd1P40201 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC18.85■□□□□ 0.61
Chd1P40201 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1P40201 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1P40201 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC18.85■□□□□ 0.61
Chd1P40201 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Chd1P40201 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Chd1P40201 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC18.85■□□□□ 0.61
Chd1P40201 Gm17192-201ENSMUST00000169031 511 ntBASIC18.85■□□□□ 0.61
Chd1P40201 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chd1P40201 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC18.85■□□□□ 0.61
Chd1P40201 Gm5870-201ENSMUST00000196461 282 ntBASIC18.85■□□□□ 0.61
Chd1P40201 Gm6855-201ENSMUST00000206307 790 ntBASIC18.85■□□□□ 0.61
Chd1P40201 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1P40201 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Chd1P40201 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd1P40201 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd1P40201 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms