Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Upk2P38575 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.31□□□□□ -0.6
Upk2P38575 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Upk2P38575 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Upk2P38575 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
Upk2P38575 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Gm14921-201ENSMUST00000118643 908 ntBASIC11.31□□□□□ -0.6
Upk2P38575 Gm22331-201ENSMUST00000158066 136 ntBASIC11.31□□□□□ -0.6
Upk2P38575 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.31□□□□□ -0.6
Upk2P38575 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Upk2P38575 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.31□□□□□ -0.6
Upk2P38575 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.31□□□□□ -0.6
Upk2P38575 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.31□□□□□ -0.6
Upk2P38575 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.31□□□□□ -0.6
Upk2P38575 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk2P38575 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.31□□□□□ -0.6
Upk2P38575 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Upk2P38575 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Upk2P38575 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Upk2P38575 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Upk2P38575 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.3□□□□□ -0.6
Upk2P38575 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Upk2P38575 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.3□□□□□ -0.6
Upk2P38575 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.3□□□□□ -0.6
Upk2P38575 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.3□□□□□ -0.6
Upk2P38575 Gm26185-201ENSMUST00000157692 266 ntBASIC11.3□□□□□ -0.6
Upk2P38575 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.3□□□□□ -0.6
Upk2P38575 Gm27847-201ENSMUST00000183711 107 ntBASIC11.3□□□□□ -0.6
Upk2P38575 Gm27375-201ENSMUST00000183799 107 ntBASIC11.3□□□□□ -0.6
Upk2P38575 Gm37042-201ENSMUST00000193816 581 ntBASIC11.3□□□□□ -0.6
Upk2P38575 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.3□□□□□ -0.6
Upk2P38575 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Upk2P38575 Gm5035-201ENSMUST00000215581 927 ntBASIC11.3□□□□□ -0.6
Upk2P38575 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Upk2P38575 Gm10146-201ENSMUST00000072739 309 ntBASIC11.3□□□□□ -0.6
Upk2P38575 Mir339-201ENSMUST00000083659 96 ntBASIC11.3□□□□□ -0.6
Upk2P38575 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Upk2P38575 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Upk2P38575 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Upk2P38575 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Upk2P38575 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Upk2P38575 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Upk2P38575 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Upk2P38575 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.29□□□□□ -0.6
Upk2P38575 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk2P38575 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Upk2P38575 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms