Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.07□□□□□ -0.16
Sox5P35710 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox5P35710 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.07□□□□□ -0.16
Sox5P35710 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Sox5P35710 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox5P35710 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.07□□□□□ -0.16
Sox5P35710 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox5P35710 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox5P35710 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox5P35710 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox5P35710 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Gm18307-201ENSMUST00000206864 949 ntBASIC14.07□□□□□ -0.16
Sox5P35710 Gm44872-201ENSMUST00000207864 420 ntBASIC14.07□□□□□ -0.16
Sox5P35710 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.07□□□□□ -0.16
Sox5P35710 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.07□□□□□ -0.16
Sox5P35710 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.07□□□□□ -0.16
Sox5P35710 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sox5P35710 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox5P35710 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Sox5P35710 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox5P35710 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sox5P35710 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.06□□□□□ -0.16
Sox5P35710 Gm16215-201ENSMUST00000161990 637 ntBASIC14.06□□□□□ -0.16
Sox5P35710 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox5P35710 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox5P35710 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.06□□□□□ -0.16
Sox5P35710 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Gm20949-201ENSMUST00000206478 952 ntBASIC14.06□□□□□ -0.16
Sox5P35710 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.06□□□□□ -0.16
Sox5P35710 Gm6458-201ENSMUST00000211573 635 ntBASIC14.06□□□□□ -0.16
Sox5P35710 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.06□□□□□ -0.16
Sox5P35710 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox5P35710 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox5P35710 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sox5P35710 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox5P35710 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox5P35710 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox5P35710 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox5P35710 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox5P35710 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.05□□□□□ -0.16
Sox5P35710 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Sox5P35710 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox5P35710 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Sox5P35710 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms