Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hes1P35428 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Paupar-201ENSMUST00000194826 3482 ntBASIC10.68□□□□□ -0.7
Hes1P35428 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hes1P35428 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hes1P35428 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.68□□□□□ -0.7
Hes1P35428 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hes1P35428 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hes1P35428 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hes1P35428 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.68□□□□□ -0.7
Hes1P35428 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Hes1P35428 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.68□□□□□ -0.7
Hes1P35428 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.68□□□□□ -0.7
Hes1P35428 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.68□□□□□ -0.7
Hes1P35428 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.68□□□□□ -0.7
Hes1P35428 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.68□□□□□ -0.7
Hes1P35428 Itm2b-204ENSMUST00000228637 783 ntBASIC10.68□□□□□ -0.7
Hes1P35428 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.68□□□□□ -0.7
Hes1P35428 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hes1P35428 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.68□□□□□ -0.7
Hes1P35428 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hes1P35428 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hes1P35428 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hes1P35428 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hes1P35428 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.67□□□□□ -0.7
Hes1P35428 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.67□□□□□ -0.7
Hes1P35428 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hes1P35428 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.67□□□□□ -0.7
Hes1P35428 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hes1P35428 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hes1P35428 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hes1P35428 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.67□□□□□ -0.7
Hes1P35428 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.67□□□□□ -0.7
Hes1P35428 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.67□□□□□ -0.7
Hes1P35428 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.67□□□□□ -0.7
Hes1P35428 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Hes1P35428 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Hes1P35428 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Hes1P35428 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.67□□□□□ -0.7
Hes1P35428 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.67□□□□□ -0.7
Hes1P35428 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hes1P35428 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.67□□□□□ -0.7
Hes1P35428 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hes1P35428 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hes1P35428 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hes1P35428 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.66□□□□□ -0.7
Hes1P35428 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Hes1P35428 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.66□□□□□ -0.7
Hes1P35428 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hes1P35428 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms