Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxc5P32043 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.98□□□□□ -0.49
Hoxc5P32043 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.98□□□□□ -0.49
Hoxc5P32043 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.98□□□□□ -0.49
Hoxc5P32043 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.98□□□□□ -0.49
Hoxc5P32043 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxc5P32043 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Hoxc5P32043 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hoxc5P32043 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hoxc5P32043 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxc5P32043 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hoxc5P32043 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.98□□□□□ -0.49
Hoxc5P32043 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.98□□□□□ -0.49
Hoxc5P32043 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxc5P32043 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxc5P32043 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hoxc5P32043 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxc5P32043 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxc5P32043 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxc5P32043 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.97□□□□□ -0.49
Hoxc5P32043 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.97□□□□□ -0.49
Hoxc5P32043 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxc5P32043 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxc5P32043 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.97□□□□□ -0.49
Hoxc5P32043 Itm2b-204ENSMUST00000228637 783 ntBASIC11.97□□□□□ -0.49
Hoxc5P32043 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxc5P32043 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxc5P32043 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.96□□□□□ -0.49
Hoxc5P32043 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Hoxc5P32043 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Hoxc5P32043 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Hoxc5P32043 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.96□□□□□ -0.49
Hoxc5P32043 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.96□□□□□ -0.49
Hoxc5P32043 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.96□□□□□ -0.49
Hoxc5P32043 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.96□□□□□ -0.49
Hoxc5P32043 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hoxc5P32043 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxc5P32043 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxc5P32043 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Hoxc5P32043 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxc5P32043 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxc5P32043 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxc5P32043 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxc5P32043 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxc5P32043 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxc5P32043 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Hoxc5P32043 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxc5P32043 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Hoxc5P32043 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxc5P32043 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms