Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a11P31650 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a11P31650 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a11P31650 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a11P31650 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a11P31650 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a11P31650 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a11P31650 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Slc6a11P31650 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a11P31650 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a11P31650 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a11P31650 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slc6a11P31650 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.27□□□□□ -0.45
Slc6a11P31650 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Mir1247-201ENSMUST00000116706 82 ntBASIC12.27□□□□□ -0.45
Slc6a11P31650 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.27□□□□□ -0.45
Slc6a11P31650 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Slc6a11P31650 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Slc6a11P31650 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Slc6a11P31650 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.27□□□□□ -0.45
Slc6a11P31650 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.27□□□□□ -0.45
Slc6a11P31650 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.27□□□□□ -0.45
Slc6a11P31650 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Slc6a11P31650 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Slc6a11P31650 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slc6a11P31650 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.26□□□□□ -0.45
Slc6a11P31650 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Slc6a11P31650 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Slc6a11P31650 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.26□□□□□ -0.45
Slc6a11P31650 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.26□□□□□ -0.45
Slc6a11P31650 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.26□□□□□ -0.45
Slc6a11P31650 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.26□□□□□ -0.45
Slc6a11P31650 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.26□□□□□ -0.45
Slc6a11P31650 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.26□□□□□ -0.45
Slc6a11P31650 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.26□□□□□ -0.45
Slc6a11P31650 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Slc6a11P31650 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Slc6a11P31650 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Olfr582-201ENSMUST00000098212 960 ntBASIC12.26□□□□□ -0.45
Slc6a11P31650 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Slc6a11P31650 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.26□□□□□ -0.45
Slc6a11P31650 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.26□□□□□ -0.45
Slc6a11P31650 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc6a11P31650 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a11P31650 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a11P31650 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.25□□□□□ -0.45
Slc6a11P31650 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a11P31650 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a11P31650 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a11P31650 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a11P31650 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a11P31650 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a11P31650 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Slc6a11P31650 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a11P31650 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Slc6a11P31650 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Slc6a11P31650 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a11P31650 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a11P31650 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms