Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.78□□□□□ -0.2
Mmp3P28862 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 Gm22042-201ENSMUST00000082989 165 ntBASIC13.78□□□□□ -0.2
Mmp3P28862 Gm26232-201ENSMUST00000083360 166 ntBASIC13.78□□□□□ -0.2
Mmp3P28862 Gm24136-201ENSMUST00000083374 165 ntBASIC13.78□□□□□ -0.2
Mmp3P28862 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.78□□□□□ -0.2
Mmp3P28862 Gm26110-201ENSMUST00000083971 165 ntBASIC13.78□□□□□ -0.2
Mmp3P28862 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.78□□□□□ -0.2
Mmp3P28862 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.78□□□□□ -0.2
Mmp3P28862 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Mmp3P28862 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.78□□□□□ -0.2
Mmp3P28862 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp3P28862 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Mmp3P28862 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Mmp3P28862 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.77□□□□□ -0.2
Mmp3P28862 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Mmp3P28862 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Mmp3P28862 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Mmp3P28862 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Mmp3P28862 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Mmp3P28862 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Mmp3P28862 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Mmp3P28862 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.77□□□□□ -0.21
Mmp3P28862 Gm13813-201ENSMUST00000120998 787 ntBASIC13.77□□□□□ -0.21
Mmp3P28862 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Mmp3P28862 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.77□□□□□ -0.21
Mmp3P28862 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Mmp3P28862 Gm8018-201ENSMUST00000173536 789 ntBASIC13.77□□□□□ -0.21
Mmp3P28862 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.77□□□□□ -0.21
Mmp3P28862 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.77□□□□□ -0.21
Mmp3P28862 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.77□□□□□ -0.21
Mmp3P28862 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.77□□□□□ -0.21
Mmp3P28862 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Mmp3P28862 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Mmp3P28862 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp3P28862 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Mmp3P28862 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.76□□□□□ -0.21
Mmp3P28862 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.76□□□□□ -0.21
Mmp3P28862 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Mmp3P28862 Gm37201-201ENSMUST00000191845 523 ntBASIC13.76□□□□□ -0.21
Mmp3P28862 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.76□□□□□ -0.21
Mmp3P28862 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.76□□□□□ -0.21
Mmp3P28862 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.76□□□□□ -0.21
Mmp3P28862 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Mmp3P28862 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.76□□□□□ -0.21
Mmp3P28862 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mmp3P28862 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Mmp3P28862 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Mmp3P28862 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Mmp3P28862 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Mmp3P28862 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Mmp3P28862 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Mmp3P28862 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.75□□□□□ -0.21
Mmp3P28862 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.75□□□□□ -0.21
Mmp3P28862 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Mmp3P28862 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Mmp3P28862 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Mmp3P28862 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.75□□□□□ -0.21
Mmp3P28862 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms