Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RxrbP28704 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RxrbP28704 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RxrbP28704 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RxrbP28704 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RxrbP28704 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RxrbP28704 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RxrbP28704 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
RxrbP28704 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RxrbP28704 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RxrbP28704 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RxrbP28704 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.95□□□□□ -0.34
RxrbP28704 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.95□□□□□ -0.34
RxrbP28704 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
RxrbP28704 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Map1b-203ENSMUST00000223725 2669 ntBASIC12.95□□□□□ -0.34
RxrbP28704 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RxrbP28704 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
RxrbP28704 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.95□□□□□ -0.34
RxrbP28704 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.95□□□□□ -0.34
RxrbP28704 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.95□□□□□ -0.34
RxrbP28704 Gm21854-201ENSMUST00000179901 471 ntBASIC12.95□□□□□ -0.34
RxrbP28704 Mir7684-201ENSMUST00000183858 60 ntBASIC12.95□□□□□ -0.34
RxrbP28704 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.95□□□□□ -0.34
RxrbP28704 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
RxrbP28704 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.95□□□□□ -0.34
RxrbP28704 Gm44872-201ENSMUST00000207864 420 ntBASIC12.95□□□□□ -0.34
RxrbP28704 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.95□□□□□ -0.34
RxrbP28704 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.95□□□□□ -0.34
RxrbP28704 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RxrbP28704 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RxrbP28704 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RxrbP28704 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
RxrbP28704 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RxrbP28704 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.94□□□□□ -0.34
RxrbP28704 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.94□□□□□ -0.34
RxrbP28704 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.94□□□□□ -0.34
RxrbP28704 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RxrbP28704 Gm27838-201ENSMUST00000184829 128 ntBASIC12.94□□□□□ -0.34
RxrbP28704 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.94□□□□□ -0.34
RxrbP28704 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.94□□□□□ -0.34
RxrbP28704 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RxrbP28704 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RxrbP28704 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.94□□□□□ -0.34
RxrbP28704 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RxrbP28704 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.93□□□□□ -0.34
RxrbP28704 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms