Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RaraP11416 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Gm13813-201ENSMUST00000120998 787 ntBASIC13.94□□□□□ -0.18
RaraP11416 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.94□□□□□ -0.18
RaraP11416 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.94□□□□□ -0.18
RaraP11416 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
RaraP11416 Gm18473-201ENSMUST00000220543 868 ntBASIC13.94□□□□□ -0.18
RaraP11416 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RaraP11416 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RaraP11416 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RaraP11416 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.93□□□□□ -0.18
RaraP11416 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.93□□□□□ -0.18
RaraP11416 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.93□□□□□ -0.18
RaraP11416 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RaraP11416 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RaraP11416 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.93□□□□□ -0.18
RaraP11416 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RaraP11416 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.93□□□□□ -0.18
RaraP11416 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
RaraP11416 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.93□□□□□ -0.18
RaraP11416 Pck2-205ENSMUST00000226352 2784 ntBASIC13.93□□□□□ -0.18
RaraP11416 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RaraP11416 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.92□□□□□ -0.18
RaraP11416 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.92□□□□□ -0.18
RaraP11416 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RaraP11416 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.92□□□□□ -0.18
RaraP11416 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Gm12928-201ENSMUST00000117115 573 ntBASIC13.92□□□□□ -0.18
RaraP11416 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.92□□□□□ -0.18
RaraP11416 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.92□□□□□ -0.18
RaraP11416 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.92□□□□□ -0.18
RaraP11416 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.92□□□□□ -0.18
RaraP11416 Gm27437-201ENSMUST00000183429 107 ntBASIC13.92□□□□□ -0.18
RaraP11416 Gm28693-202ENSMUST00000190758 331 ntBASIC13.92□□□□□ -0.18
RaraP11416 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.92□□□□□ -0.18
RaraP11416 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.92□□□□□ -0.18
RaraP11416 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RaraP11416 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.92□□□□□ -0.18
RaraP11416 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RaraP11416 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.91□□□□□ -0.18
RaraP11416 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RaraP11416 Matn2-203ENSMUST00000226766 3252 ntBASIC13.91□□□□□ -0.18
RaraP11416 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RaraP11416 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RaraP11416 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RaraP11416 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RaraP11416 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms