Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdh3P10287 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdh3P10287 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdh3P10287 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Gm12485-201ENSMUST00000119641 291 ntBASIC11.97□□□□□ -0.49
Cdh3P10287 Gm15376-201ENSMUST00000122258 783 ntBASIC11.97□□□□□ -0.49
Cdh3P10287 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdh3P10287 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdh3P10287 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.97□□□□□ -0.49
Cdh3P10287 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.97□□□□□ -0.49
Cdh3P10287 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Gm18624-201ENSMUST00000220966 658 ntBASIC11.97□□□□□ -0.49
Cdh3P10287 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdh3P10287 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdh3P10287 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdh3P10287 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdh3P10287 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdh3P10287 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdh3P10287 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh3P10287 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdh3P10287 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cdh3P10287 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Cdh3P10287 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.96□□□□□ -0.49
Cdh3P10287 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cdh3P10287 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Cdh3P10287 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdh3P10287 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cdh3P10287 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.96□□□□□ -0.49
Cdh3P10287 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Gm12341-201ENSMUST00000119724 503 ntBASIC11.96□□□□□ -0.49
Cdh3P10287 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.96□□□□□ -0.49
Cdh3P10287 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdh3P10287 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdh3P10287 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdh3P10287 Mir6392-201ENSMUST00000184924 108 ntBASIC11.96□□□□□ -0.49
Cdh3P10287 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.96□□□□□ -0.49
Cdh3P10287 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.96□□□□□ -0.49
Cdh3P10287 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cdh3P10287 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh3P10287 Map1b-203ENSMUST00000223725 2669 ntBASIC11.96□□□□□ -0.5
Cdh3P10287 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh3P10287 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh3P10287 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Cdh3P10287 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Cdh3P10287 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh3P10287 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh3P10287 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh3P10287 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.96□□□□□ -0.5
Cdh3P10287 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Cdh3P10287 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh3P10287 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh3P10287 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdh3P10287 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh3P10287 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh3P10287 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh3P10287 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh3P10287 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh3P10287 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms