Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.24□□□□□ -0.61
UbbP0CG49 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
UbbP0CG49 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
UbbP0CG49 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.24□□□□□ -0.61
UbbP0CG49 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.24□□□□□ -0.61
UbbP0CG49 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.24□□□□□ -0.61
UbbP0CG49 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
UbbP0CG49 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
UbbP0CG49 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.24□□□□□ -0.61
UbbP0CG49 Gm26464-201ENSMUST00000157094 305 ntBASIC11.24□□□□□ -0.61
UbbP0CG49 Gm27702-201ENSMUST00000184512 56 ntBASIC11.24□□□□□ -0.61
UbbP0CG49 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Gm43094-201ENSMUST00000196549 921 ntBASIC11.24□□□□□ -0.61
UbbP0CG49 Gm19078-201ENSMUST00000206311 727 ntBASIC11.24□□□□□ -0.61
UbbP0CG49 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.24□□□□□ -0.61
UbbP0CG49 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.24□□□□□ -0.61
UbbP0CG49 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.24□□□□□ -0.61
UbbP0CG49 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.24□□□□□ -0.61
UbbP0CG49 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
UbbP0CG49 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
UbbP0CG49 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.24□□□□□ -0.61
UbbP0CG49 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
UbbP0CG49 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
UbbP0CG49 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
UbbP0CG49 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UbbP0CG49 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.23□□□□□ -0.61
UbbP0CG49 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
UbbP0CG49 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.23□□□□□ -0.61
UbbP0CG49 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
UbbP0CG49 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
UbbP0CG49 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.23□□□□□ -0.61
UbbP0CG49 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.23□□□□□ -0.61
UbbP0CG49 Gm5279-201ENSMUST00000199575 745 ntBASIC11.23□□□□□ -0.61
UbbP0CG49 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.23□□□□□ -0.61
UbbP0CG49 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.23□□□□□ -0.61
UbbP0CG49 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.23□□□□□ -0.61
UbbP0CG49 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
UbbP0CG49 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
UbbP0CG49 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.23□□□□□ -0.61
UbbP0CG49 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.23□□□□□ -0.61
UbbP0CG49 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UbbP0CG49 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms