Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.22□□□□□ -0.45
ApoeP08226 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
ApoeP08226 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ApoeP08226 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
ApoeP08226 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.21□□□□□ -0.45
ApoeP08226 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
ApoeP08226 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.21□□□□□ -0.45
ApoeP08226 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.21□□□□□ -0.45
ApoeP08226 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.21□□□□□ -0.45
ApoeP08226 Gm27618-201ENSMUST00000183671 60 ntBASIC12.21□□□□□ -0.45
ApoeP08226 Gm27430-201ENSMUST00000184585 107 ntBASIC12.21□□□□□ -0.45
ApoeP08226 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.21□□□□□ -0.45
ApoeP08226 Gm43094-201ENSMUST00000196549 921 ntBASIC12.21□□□□□ -0.45
ApoeP08226 Gm44333-201ENSMUST00000197168 107 ntBASIC12.21□□□□□ -0.45
ApoeP08226 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.21□□□□□ -0.45
ApoeP08226 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Gm6888-201ENSMUST00000221983 706 ntBASIC12.21□□□□□ -0.45
ApoeP08226 Chchd1-203ENSMUST00000224633 557 ntBASIC12.21□□□□□ -0.45
ApoeP08226 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.21□□□□□ -0.45
ApoeP08226 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ApoeP08226 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.21□□□□□ -0.45
ApoeP08226 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
ApoeP08226 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.21□□□□□ -0.46
ApoeP08226 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.21□□□□□ -0.46
ApoeP08226 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
ApoeP08226 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.21□□□□□ -0.46
ApoeP08226 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ApoeP08226 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
ApoeP08226 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
ApoeP08226 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ApoeP08226 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ApoeP08226 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.2□□□□□ -0.46
ApoeP08226 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
ApoeP08226 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 AW822252-206ENSMUST00000208904 237 ntBASIC12.2□□□□□ -0.46
ApoeP08226 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.2□□□□□ -0.46
ApoeP08226 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.2□□□□□ -0.46
ApoeP08226 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms