Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.18□□□□□ -0.78
P01788 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.18□□□□□ -0.78
P01788 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
P01788 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.18□□□□□ -0.78
P01788 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Gm13689-201ENSMUST00000119360 685 ntBASIC10.18□□□□□ -0.78
P01788 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
P01788 Gm7730-201ENSMUST00000212486 454 ntBASIC10.18□□□□□ -0.78
P01788 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.18□□□□□ -0.78
P01788 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P01788 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P01788 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
P01788 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.18□□□□□ -0.78
P01788 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.17□□□□□ -0.78
P01788 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.17□□□□□ -0.78
P01788 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.17□□□□□ -0.78
P01788 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.17□□□□□ -0.78
P01788 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
P01788 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.17□□□□□ -0.78
P01788 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.17□□□□□ -0.78
P01788 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.17□□□□□ -0.78
P01788 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.17□□□□□ -0.78
P01788 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.17□□□□□ -0.78
P01788 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.17□□□□□ -0.78
P01788 Gm28760-201ENSMUST00000185995 736 ntBASIC10.17□□□□□ -0.78
P01788 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.17□□□□□ -0.78
P01788 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.17□□□□□ -0.78
P01788 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.17□□□□□ -0.78
P01788 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
P01788 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
P01788 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
P01788 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.17□□□□□ -0.78
P01788 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01788 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01788 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
P01788 Paupar-201ENSMUST00000194826 3482 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms