Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.94□□□□□ -0.18
Vti1aO89116 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Vti1aO89116 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Gm15236-201ENSMUST00000117309 379 ntBASIC13.93□□□□□ -0.18
Vti1aO89116 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.93□□□□□ -0.18
Vti1aO89116 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.93□□□□□ -0.18
Vti1aO89116 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.93□□□□□ -0.18
Vti1aO89116 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.93□□□□□ -0.18
Vti1aO89116 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Vti1aO89116 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.93□□□□□ -0.18
Vti1aO89116 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.93□□□□□ -0.18
Vti1aO89116 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Vti1aO89116 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.93□□□□□ -0.18
Vti1aO89116 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vti1aO89116 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Vti1aO89116 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.93□□□□□ -0.18
Vti1aO89116 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1aO89116 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.92□□□□□ -0.18
Vti1aO89116 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Vti1aO89116 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vti1aO89116 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.92□□□□□ -0.18
Vti1aO89116 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.92□□□□□ -0.18
Vti1aO89116 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Gm11591-201ENSMUST00000120063 702 ntBASIC13.92□□□□□ -0.18
Vti1aO89116 Gm13786-201ENSMUST00000122371 333 ntBASIC13.92□□□□□ -0.18
Vti1aO89116 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.92□□□□□ -0.18
Vti1aO89116 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Vti1aO89116 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vti1aO89116 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vti1aO89116 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1aO89116 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Vti1aO89116 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vti1aO89116 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.91□□□□□ -0.18
Vti1aO89116 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.91□□□□□ -0.18
Vti1aO89116 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vti1aO89116 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vti1aO89116 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.91□□□□□ -0.18
Vti1aO89116 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.91□□□□□ -0.18
Vti1aO89116 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Gm7809-201ENSMUST00000153199 742 ntBASIC13.91□□□□□ -0.18
Vti1aO89116 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.91□□□□□ -0.18
Vti1aO89116 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.91□□□□□ -0.18
Vti1aO89116 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.91□□□□□ -0.18
Vti1aO89116 Gm8227-201ENSMUST00000223306 571 ntBASIC13.91□□□□□ -0.18
Vti1aO89116 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vti1aO89116 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vti1aO89116 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vti1aO89116 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vti1aO89116 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms