Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.37□□□□□ -0.43
Hcn1O88704 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Hcn1O88704 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.37□□□□□ -0.43
Hcn1O88704 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.37□□□□□ -0.43
Hcn1O88704 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hcn1O88704 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.37□□□□□ -0.43
Hcn1O88704 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.37□□□□□ -0.43
Hcn1O88704 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.37□□□□□ -0.43
Hcn1O88704 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hcn1O88704 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.37□□□□□ -0.43
Hcn1O88704 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.37□□□□□ -0.43
Hcn1O88704 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.36□□□□□ -0.43
Hcn1O88704 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Hcn1O88704 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.36□□□□□ -0.43
Hcn1O88704 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.36□□□□□ -0.43
Hcn1O88704 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Hcn1O88704 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.36□□□□□ -0.43
Hcn1O88704 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.36□□□□□ -0.43
Hcn1O88704 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Hcn1O88704 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Gm13612-201ENSMUST00000119276 390 ntBASIC12.36□□□□□ -0.43
Hcn1O88704 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.36□□□□□ -0.43
Hcn1O88704 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.36□□□□□ -0.43
Hcn1O88704 Gm6152-201ENSMUST00000151704 340 ntBASIC12.36□□□□□ -0.43
Hcn1O88704 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.36□□□□□ -0.43
Hcn1O88704 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.36□□□□□ -0.43
Hcn1O88704 Gm27839-201ENSMUST00000184242 106 ntBASIC12.36□□□□□ -0.43
Hcn1O88704 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.36□□□□□ -0.43
Hcn1O88704 Gm38671-201ENSMUST00000200573 130 ntBASIC12.36□□□□□ -0.43
Hcn1O88704 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Hcn1O88704 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hcn1O88704 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hcn1O88704 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Hcn1O88704 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hcn1O88704 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Hcn1O88704 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms