Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Gm5566-201ENSMUST00000116118 459 ntBASIC11.73□□□□□ -0.53
Matn3O35701 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Matn3O35701 Gm12428-201ENSMUST00000119844 727 ntBASIC11.73□□□□□ -0.53
Matn3O35701 Gm24420-201ENSMUST00000176676 59 ntBASIC11.73□□□□□ -0.53
Matn3O35701 Gm33320-201ENSMUST00000192232 530 ntBASIC11.73□□□□□ -0.53
Matn3O35701 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Matn3O35701 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.73□□□□□ -0.53
Matn3O35701 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.73□□□□□ -0.53
Matn3O35701 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.73□□□□□ -0.53
Matn3O35701 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
Matn3O35701 Dupd1-202ENSMUST00000224735 548 ntBASIC11.73□□□□□ -0.53
Matn3O35701 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Matn3O35701 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Matn3O35701 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Matn3O35701 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Matn3O35701 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.72□□□□□ -0.53
Matn3O35701 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.72□□□□□ -0.53
Matn3O35701 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Matn3O35701 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Matn3O35701 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Matn3O35701 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Gm15460-201ENSMUST00000118147 391 ntBASIC11.72□□□□□ -0.53
Matn3O35701 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.72□□□□□ -0.53
Matn3O35701 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.72□□□□□ -0.53
Matn3O35701 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Matn3O35701 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Matn3O35701 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Matn3O35701 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.72□□□□□ -0.53
Matn3O35701 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.72□□□□□ -0.53
Matn3O35701 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Matn3O35701 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.72□□□□□ -0.53
Matn3O35701 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Matn3O35701 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Matn3O35701 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Matn3O35701 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn3O35701 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.71□□□□□ -0.53
Matn3O35701 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.71□□□□□ -0.53
Matn3O35701 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.71□□□□□ -0.53
Matn3O35701 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 187.4 ms