Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.19□□□□□ -0.3
Phox2bO35690 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Phox2bO35690 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.18□□□□□ -0.3
Phox2bO35690 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Phox2bO35690 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Phox2bO35690 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Phox2bO35690 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Gm6461-201ENSMUST00000120015 633 ntBASIC13.18□□□□□ -0.3
Phox2bO35690 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Phox2bO35690 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Phox2bO35690 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Phox2bO35690 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.18□□□□□ -0.3
Phox2bO35690 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.18□□□□□ -0.3
Phox2bO35690 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Gm8581-201ENSMUST00000188636 890 ntBASIC13.18□□□□□ -0.3
Phox2bO35690 Gm29608-201ENSMUST00000190444 463 ntBASIC13.18□□□□□ -0.3
Phox2bO35690 Gm37684-201ENSMUST00000192779 355 ntBASIC13.18□□□□□ -0.3
Phox2bO35690 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.18□□□□□ -0.3
Phox2bO35690 Gm43787-201ENSMUST00000197792 1037 ntBASIC13.18□□□□□ -0.3
Phox2bO35690 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Gm44262-201ENSMUST00000204969 372 ntBASIC13.18□□□□□ -0.3
Phox2bO35690 AC153899.1-201ENSMUST00000214092 1117 ntBASIC13.18□□□□□ -0.3
Phox2bO35690 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.18□□□□□ -0.3
Phox2bO35690 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.18□□□□□ -0.3
Phox2bO35690 AC162940.1-201ENSMUST00000224745 1167 ntBASIC13.18□□□□□ -0.3
Phox2bO35690 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Phox2bO35690 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phox2bO35690 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Phox2bO35690 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Phox2bO35690 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.17□□□□□ -0.3
Phox2bO35690 Gm15131-201ENSMUST00000119124 595 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 Gm15276-201ENSMUST00000145953 498 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC13.17□□□□□ -0.3
Phox2bO35690 Gm19459-201ENSMUST00000176240 835 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.17□□□□□ -0.3
Phox2bO35690 Gm5070-201ENSMUST00000177599 862 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Phox2bO35690 Gm28180-201ENSMUST00000189608 722 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Gm18944-201ENSMUST00000207672 643 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 Gm45701-201ENSMUST00000212049 235 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC13.17□□□□□ -0.3
Phox2bO35690 CT030194.1-201ENSMUST00000225507 532 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 CT025525.2-201ENSMUST00000227743 423 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Mir497b-201ENSMUST00000093601 125 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Phox2bO35690 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.17□□□□□ -0.3
Phox2bO35690 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.17□□□□□ -0.3
Phox2bO35690 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Phox2bO35690 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Phox2bO35690 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Phox2bO35690 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Phox2bO35690 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Phox2bO35690 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Phox2bO35690 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Phox2bO35690 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Phox2bO35690 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Phox2bO35690 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Phox2bO35690 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Phox2bO35690 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Phox2bO35690 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Phox2bO35690 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Phox2bO35690 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Phox2bO35690 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Phox2bO35690 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Phox2bO35690 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms