Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm4768-201ENSMUST00000206199 686 ntBASIC12.61□□□□□ -0.39
Npc1O35604 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npc1O35604 Gm10478-201ENSMUST00000084451 396 ntBASIC12.61□□□□□ -0.39
Npc1O35604 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npc1O35604 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Npc1O35604 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.61□□□□□ -0.39
Npc1O35604 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Npc1O35604 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npc1O35604 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npc1O35604 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npc1O35604 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npc1O35604 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.61□□□□□ -0.39
Npc1O35604 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npc1O35604 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npc1O35604 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npc1O35604 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Npc1O35604 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Npc1O35604 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Npc1O35604 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Npc1O35604 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Npc1O35604 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Npc1O35604 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.6□□□□□ -0.39
Npc1O35604 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.6□□□□□ -0.39
Npc1O35604 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Npc1O35604 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Gm19931-201ENSMUST00000198920 368 ntBASIC12.6□□□□□ -0.39
Npc1O35604 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.6□□□□□ -0.39
Npc1O35604 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.6□□□□□ -0.39
Npc1O35604 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.6□□□□□ -0.39
Npc1O35604 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.6□□□□□ -0.39
Npc1O35604 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Npc1O35604 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Npc1O35604 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Npc1O35604 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.59□□□□□ -0.39
Npc1O35604 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Npc1O35604 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.59□□□□□ -0.39
Npc1O35604 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Gm26185-201ENSMUST00000157692 266 ntBASIC12.59□□□□□ -0.39
Npc1O35604 Gm16379-201ENSMUST00000161469 348 ntBASIC12.59□□□□□ -0.39
Npc1O35604 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.59□□□□□ -0.39
Npc1O35604 Gm8762-201ENSMUST00000193486 339 ntBASIC12.59□□□□□ -0.39
Npc1O35604 Gm6458-201ENSMUST00000211573 635 ntBASIC12.59□□□□□ -0.39
Npc1O35604 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.59□□□□□ -0.39
Npc1O35604 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.59□□□□□ -0.39
Npc1O35604 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Snora73a-201ENSMUST00000082453 205 ntBASIC12.59□□□□□ -0.39
Npc1O35604 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.59□□□□□ -0.39
Npc1O35604 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.59□□□□□ -0.39
Npc1O35604 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Npc1O35604 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Npc1O35604 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Npc1O35604 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npc1O35604 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms