Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.33■□□□□ 0.05
Hdac1O09106 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac1O09106 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac1O09106 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac1O09106 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac1O09106 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac1O09106 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac1O09106 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac1O09106 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.33■□□□□ 0.05
Hdac1O09106 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac1O09106 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.33■□□□□ 0.04
Hdac1O09106 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hdac1O09106 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.33■□□□□ 0.04
Hdac1O09106 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Hdac1O09106 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Gm18307-201ENSMUST00000206864 949 ntBASIC15.33■□□□□ 0.04
Hdac1O09106 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.33■□□□□ 0.04
Hdac1O09106 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Hdac1O09106 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Hdac1O09106 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC15.33■□□□□ 0.04
Hdac1O09106 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Hdac1O09106 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Hdac1O09106 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac1O09106 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Hdac1O09106 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hdac1O09106 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hdac1O09106 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.32■□□□□ 0.04
Hdac1O09106 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Hdac1O09106 Gm27390-201ENSMUST00000184516 176 ntBASIC15.32■□□□□ 0.04
Hdac1O09106 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.32■□□□□ 0.04
Hdac1O09106 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Hdac1O09106 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hdac1O09106 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hdac1O09106 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac1O09106 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hdac1O09106 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.31■□□□□ 0.04
Hdac1O09106 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hdac1O09106 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hdac1O09106 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.31■□□□□ 0.04
Hdac1O09106 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Gm19184-201ENSMUST00000196798 928 ntBASIC15.31■□□□□ 0.04
Hdac1O09106 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.31■□□□□ 0.04
Hdac1O09106 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.31■□□□□ 0.04
Hdac1O09106 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hdac1O09106 Mir339-201ENSMUST00000083659 96 ntBASIC15.31■□□□□ 0.04
Hdac1O09106 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.31■□□□□ 0.04
Hdac1O09106 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hdac1O09106 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Gm37472-201ENSMUST00000192342 4052 ntBASIC15.31■□□□□ 0.04
Hdac1O09106 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac1O09106 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hdac1O09106 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms