Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trove2O08848 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Trove2O08848 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.27□□□□□ -0.28
Trove2O08848 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.27□□□□□ -0.28
Trove2O08848 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trove2O08848 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.27□□□□□ -0.28
Trove2O08848 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trove2O08848 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trove2O08848 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trove2O08848 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trove2O08848 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trove2O08848 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.27□□□□□ -0.28
Trove2O08848 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trove2O08848 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trove2O08848 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.27□□□□□ -0.29
Trove2O08848 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.27□□□□□ -0.29
Trove2O08848 Gm9522-201ENSMUST00000182394 926 ntBASIC13.27□□□□□ -0.29
Trove2O08848 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.27□□□□□ -0.29
Trove2O08848 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.27□□□□□ -0.29
Trove2O08848 Gm17795-201ENSMUST00000214505 757 ntBASIC13.27□□□□□ -0.29
Trove2O08848 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Gm20445-201ENSMUST00000061905 565 ntBASIC13.27□□□□□ -0.29
Trove2O08848 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trove2O08848 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trove2O08848 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.27□□□□□ -0.29
Trove2O08848 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trove2O08848 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.27□□□□□ -0.29
Trove2O08848 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Trove2O08848 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trove2O08848 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trove2O08848 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trove2O08848 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.27□□□□□ -0.29
Trove2O08848 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trove2O08848 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trove2O08848 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.26□□□□□ -0.29
Trove2O08848 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.26□□□□□ -0.29
Trove2O08848 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trove2O08848 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trove2O08848 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trove2O08848 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Gm15487-201ENSMUST00000122373 465 ntBASIC13.26□□□□□ -0.29
Trove2O08848 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Gm27772-201ENSMUST00000184900 187 ntBASIC13.26□□□□□ -0.29
Trove2O08848 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.26□□□□□ -0.29
Trove2O08848 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.26□□□□□ -0.29
Trove2O08848 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.26□□□□□ -0.29
Trove2O08848 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.26□□□□□ -0.29
Trove2O08848 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trove2O08848 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trove2O08848 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.26□□□□□ -0.29
Trove2O08848 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.26□□□□□ -0.29
Trove2O08848 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trove2O08848 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.26□□□□□ -0.29
Trove2O08848 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.26□□□□□ -0.29
Trove2O08848 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trove2O08848 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trove2O08848 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.25□□□□□ -0.29
Trove2O08848 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Trove2O08848 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms