Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Casp6O08738 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Casp6O08738 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Casp6O08738 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.06□□□□□ -0.64
Casp6O08738 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.05□□□□□ -0.64
Casp6O08738 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Casp6O08738 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.05□□□□□ -0.64
Casp6O08738 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.05□□□□□ -0.64
Casp6O08738 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Casp6O08738 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Casp6O08738 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Casp6O08738 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.05□□□□□ -0.64
Casp6O08738 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.05□□□□□ -0.64
Casp6O08738 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Casp6O08738 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.05□□□□□ -0.64
Casp6O08738 Gm16505-201ENSMUST00000179981 232 ntBASIC11.05□□□□□ -0.64
Casp6O08738 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.05□□□□□ -0.64
Casp6O08738 Gm3096-201ENSMUST00000185770 364 ntBASIC11.05□□□□□ -0.64
Casp6O08738 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Gm32025-201ENSMUST00000217960 307 ntBASIC11.05□□□□□ -0.64
Casp6O08738 Gm45925-201ENSMUST00000218882 744 ntBASIC11.05□□□□□ -0.64
Casp6O08738 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Casp6O08738 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.05□□□□□ -0.64
Casp6O08738 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.05□□□□□ -0.64
Casp6O08738 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.05□□□□□ -0.64
Casp6O08738 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.05□□□□□ -0.64
Casp6O08738 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Casp6O08738 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Casp6O08738 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.04□□□□□ -0.64
Casp6O08738 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.04□□□□□ -0.64
Casp6O08738 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Casp6O08738 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Casp6O08738 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Casp6O08738 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.04□□□□□ -0.64
Casp6O08738 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.04□□□□□ -0.64
Casp6O08738 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.04□□□□□ -0.64
Casp6O08738 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Gm24990-201ENSMUST00000157406 323 ntBASIC11.04□□□□□ -0.64
Casp6O08738 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.04□□□□□ -0.64
Casp6O08738 Gm2260-201ENSMUST00000184965 657 ntBASIC11.04□□□□□ -0.64
Casp6O08738 Gm38317-201ENSMUST00000195564 343 ntBASIC11.04□□□□□ -0.64
Casp6O08738 Gm3786-201ENSMUST00000202659 378 ntBASIC11.04□□□□□ -0.64
Casp6O08738 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.04□□□□□ -0.64
Casp6O08738 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.04□□□□□ -0.64
Casp6O08738 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.04□□□□□ -0.64
Casp6O08738 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.04□□□□□ -0.64
Casp6O08738 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Casp6O08738 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.04□□□□□ -0.64
Casp6O08738 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Casp6O08738 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.04□□□□□ -0.64
Casp6O08738 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Casp6O08738 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms