Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm24975-201ENSMUST00000178492 101 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm23189-201ENSMUST00000178954 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm25100-201ENSMUST00000179750 101 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm23064-201ENSMUST00000179866 101 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm10169-201ENSMUST00000121822 348 ntBASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm27826-201ENSMUST00000175282 255 ntBASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm9081-201ENSMUST00000182346 991 ntBASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm9022-201ENSMUST00000182482 992 ntBASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm5507-201ENSMUST00000091897 1008 ntBASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm13192-201ENSMUST00000101199 208 ntBASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm10443-201ENSMUST00000119024 210 ntBASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm38103-201ENSMUST00000191707 864 ntBASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm20568-201ENSMUST00000197129 208 ntBASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a3E9PWQ3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Gm21577-201ENSMUST00000190823 697 ntBASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Gm20802-201ENSMUST00000190832 698 ntBASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col6a3E9PWQ3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Gm17192-201ENSMUST00000169031 511 ntBASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Kif4-ps-202ENSMUST00000185083 652 ntBASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Gm43506-201ENSMUST00000200675 753 ntBASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms