Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm45784-201ENSMUST00000188360 142 ntBASIC12.58□□□□□ -0.4
Clip3B9EHT4 Gm43818-201ENSMUST00000200605 466 ntBASIC12.58□□□□□ -0.4
Clip3B9EHT4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.58□□□□□ -0.4
Clip3B9EHT4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.57□□□□□ -0.4
Clip3B9EHT4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.57□□□□□ -0.4
Clip3B9EHT4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Gm12957-201ENSMUST00000117835 377 ntBASIC12.57□□□□□ -0.4
Clip3B9EHT4 Gm12203-201ENSMUST00000118235 598 ntBASIC12.57□□□□□ -0.4
Clip3B9EHT4 Gm12209-201ENSMUST00000120089 596 ntBASIC12.57□□□□□ -0.4
Clip3B9EHT4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.57□□□□□ -0.4
Clip3B9EHT4 Gm43630-201ENSMUST00000201550 776 ntBASIC12.57□□□□□ -0.4
Clip3B9EHT4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.57□□□□□ -0.4
Clip3B9EHT4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.57□□□□□ -0.4
Clip3B9EHT4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.57□□□□□ -0.4
Clip3B9EHT4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip3B9EHT4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Gm8213-201ENSMUST00000118191 441 ntBASIC12.56□□□□□ -0.4
Clip3B9EHT4 Gm10156-201ENSMUST00000122364 462 ntBASIC12.56□□□□□ -0.4
Clip3B9EHT4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip3B9EHT4 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.56□□□□□ -0.4
Clip3B9EHT4 Gm27331-201ENSMUST00000183705 60 ntBASIC12.56□□□□□ -0.4
Clip3B9EHT4 Gm29127-201ENSMUST00000188304 517 ntBASIC12.56□□□□□ -0.4
Clip3B9EHT4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms