Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Gm45433-201ENSMUST00000209386 247 ntBASIC10.89□□□□□ -0.67
Col6a4A2AX52 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Mir1943-201ENSMUST00000158276 73 ntBASIC10.88□□□□□ -0.67
Col6a4A2AX52 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.88□□□□□ -0.67
Col6a4A2AX52 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.88□□□□□ -0.67
Col6a4A2AX52 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.88□□□□□ -0.67
Col6a4A2AX52 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.88□□□□□ -0.67
Col6a4A2AX52 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Gm14665-201ENSMUST00000122294 557 ntBASIC10.87□□□□□ -0.67
Col6a4A2AX52 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.87□□□□□ -0.67
Col6a4A2AX52 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Gm44405-201ENSMUST00000198952 126 ntBASIC10.87□□□□□ -0.67
Col6a4A2AX52 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Gm17391-201ENSMUST00000171036 126 ntBASIC10.87□□□□□ -0.67
Col6a4A2AX52 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a4A2AX52 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm26361-201ENSMUST00000158868 186 ntBASIC10.86□□□□□ -0.67
Col6a4A2AX52 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm25700-201ENSMUST00000177693 110 ntBASIC10.86□□□□□ -0.67
Col6a4A2AX52 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm18893-201ENSMUST00000198416 943 ntBASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm8913-201ENSMUST00000209491 641 ntBASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms