Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm13297-201ENSMUST00000120205 934 ntBASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Gm2991-201ENSMUST00000173338 480 ntBASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Gm26461-201ENSMUST00000175064 290 ntBASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Gm6222-202ENSMUST00000182143 629 ntBASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Gm37259-201ENSMUST00000193903 849 ntBASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Gm44069-201ENSMUST00000204898 506 ntBASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Gm24255-201ENSMUST00000104481 128 ntBASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cfap99A0A140LIX9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Gm22323-201ENSMUST00000103832 109 ntBASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Mir433-201ENSMUST00000093564 124 ntBASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.42■□□□□ 0.06
Cfap99A0A140LIX9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cfap99A0A140LIX9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cfap99A0A140LIX9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cfap99A0A140LIX9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms