Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Mir698-201ENSMUST00000102164 109 ntBASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Gm37714-201ENSMUST00000194742 342 ntBASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Gm10459-201ENSMUST00000202708 1155 ntBASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Gm7229-201ENSMUST00000214719 1007 ntBASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 AC164629.2-201ENSMUST00000217916 270 ntBASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 CT030684.1-201ENSMUST00000227292 914 ntBASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Mir497b-201ENSMUST00000093601 125 ntBASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav8-1A0A075B641 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav8-1A0A075B641 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC9.21□□□□□ -0.94
Trav8-1A0A075B641 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav8-1A0A075B641 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC9.21□□□□□ -0.94
Trav8-1A0A075B641 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav8-1A0A075B641 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav8-1A0A075B641 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms