Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Gm16215-201ENSMUST00000161990 637 ntBASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Gm42612-201ENSMUST00000197986 623 ntBASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Gm43170-201ENSMUST00000199827 612 ntBASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.66□□□□□ -0.54
H2afb3S4R1G7 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.65□□□□□ -0.54
H2afb3S4R1G7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Gm6447-201ENSMUST00000118905 835 ntBASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
H2afb3S4R1G7 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
H2afb3S4R1G7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
H2afb3S4R1G7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.64□□□□□ -0.55
H2afb3S4R1G7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Gm20949-201ENSMUST00000206478 952 ntBASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Gm18307-201ENSMUST00000206864 949 ntBASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.64□□□□□ -0.55
H2afb3S4R1G7 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms