Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm12203-201ENSMUST00000118235 598 ntBASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm12209-201ENSMUST00000120089 596 ntBASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm27331-201ENSMUST00000183705 60 ntBASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm38144-201ENSMUST00000192790 465 ntBASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mrpl40Q9Z2Q5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mrpl40Q9Z2Q5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mrpl40Q9Z2Q5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms