Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.47□□□□□ -0.09
AmfrQ9R049 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.47□□□□□ -0.09
AmfrQ9R049 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.47□□□□□ -0.09
AmfrQ9R049 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.47□□□□□ -0.09
AmfrQ9R049 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.47□□□□□ -0.09
AmfrQ9R049 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AmfrQ9R049 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AmfrQ9R049 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
AmfrQ9R049 Gm6091-201ENSMUST00000098307 165 ntBASIC14.47□□□□□ -0.09
AmfrQ9R049 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AmfrQ9R049 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AmfrQ9R049 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AmfrQ9R049 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AmfrQ9R049 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.47□□□□□ -0.09
AmfrQ9R049 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AmfrQ9R049 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AmfrQ9R049 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.47□□□□□ -0.09
AmfrQ9R049 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.47□□□□□ -0.09
AmfrQ9R049 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AmfrQ9R049 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AmfrQ9R049 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AmfrQ9R049 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AmfrQ9R049 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
AmfrQ9R049 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
AmfrQ9R049 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AmfrQ9R049 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
AmfrQ9R049 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.46□□□□□ -0.09
AmfrQ9R049 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AmfrQ9R049 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
AmfrQ9R049 Gm11803-201ENSMUST00000119966 444 ntBASIC14.46□□□□□ -0.09
AmfrQ9R049 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AmfrQ9R049 Gm27847-201ENSMUST00000183711 107 ntBASIC14.46□□□□□ -0.09
AmfrQ9R049 Gm27375-201ENSMUST00000183799 107 ntBASIC14.46□□□□□ -0.09
AmfrQ9R049 Gm27839-201ENSMUST00000184242 106 ntBASIC14.46□□□□□ -0.09
AmfrQ9R049 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AmfrQ9R049 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
AmfrQ9R049 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AmfrQ9R049 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AmfrQ9R049 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.46□□□□□ -0.09
AmfrQ9R049 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AmfrQ9R049 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AmfrQ9R049 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AmfrQ9R049 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.46□□□□□ -0.09
AmfrQ9R049 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
AmfrQ9R049 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.46□□□□□ -0.1
AmfrQ9R049 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
AmfrQ9R049 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AmfrQ9R049 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AmfrQ9R049 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
AmfrQ9R049 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
AmfrQ9R049 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.45□□□□□ -0.1
AmfrQ9R049 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Mir7085-201ENSMUST00000184353 66 ntBASIC14.45□□□□□ -0.1
AmfrQ9R049 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.45□□□□□ -0.1
AmfrQ9R049 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.45□□□□□ -0.1
AmfrQ9R049 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
AmfrQ9R049 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
AmfrQ9R049 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AmfrQ9R049 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.44□□□□□ -0.1
AmfrQ9R049 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.44□□□□□ -0.1
AmfrQ9R049 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms