Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Gm9823-201ENSMUST00000051212 327 ntBASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf3Q9QXK7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Gm23363-201ENSMUST00000175024 79 ntBASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Gm43133-201ENSMUST00000197472 463 ntBASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Gm43118-201ENSMUST00000199149 775 ntBASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf3Q9QXK7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms