Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpne8Q9DC53 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Gm11918-201ENSMUST00000121660 179 ntBASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Gm8515-201ENSMUST00000194852 576 ntBASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cpne8Q9DC53 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Gm12203-201ENSMUST00000118235 598 ntBASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Gm12209-201ENSMUST00000120089 596 ntBASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Gm10156-201ENSMUST00000122364 462 ntBASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Gm8652-201ENSMUST00000181363 964 ntBASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.44□□□□□ -0.26
Cpne8Q9DC53 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Cpne8Q9DC53 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.43□□□□□ -0.26
Cpne8Q9DC53 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms