Protein–RNA interactions for Protein: Q9DA73

Ccdc89, Coiled-coil domain-containing protein 89, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc89Q9DA73 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc89Q9DA73 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc89Q9DA73 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc89Q9DA73 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc89Q9DA73 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc89Q9DA73 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc89Q9DA73 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Gm13612-201ENSMUST00000119276 390 ntBASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc89Q9DA73 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gm11918-201ENSMUST00000121660 179 ntBASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gm28693-202ENSMUST00000190758 331 ntBASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gm6745-201ENSMUST00000199216 526 ntBASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gm45384-201ENSMUST00000210451 277 ntBASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gm9908-201ENSMUST00000211534 448 ntBASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc89Q9DA73 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Gm11618-201ENSMUST00000117946 267 ntBASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc89Q9DA73 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms