Protein–RNA interactions for Protein: Q9D8D0

Tnfrsf13c, Tumor necrosis factor receptor superfamily member 13C, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13cQ9D8D0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf13cQ9D8D0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf13cQ9D8D0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf13cQ9D8D0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf13cQ9D8D0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf13cQ9D8D0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf13cQ9D8D0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf13cQ9D8D0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Tnfrsf13cQ9D8D0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf13cQ9D8D0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Gm5312-201ENSMUST00000203728 547 ntBASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Gm5779-201ENSMUST00000218467 910 ntBASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf13cQ9D8D0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Mir449b-201ENSMUST00000104833 80 ntBASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Gm17330-201ENSMUST00000221047 165 ntBASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Tnfrsf13cQ9D8D0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms