Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1aQ9D132 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Upk1aQ9D132 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1aQ9D132 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Upk1aQ9D132 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1aQ9D132 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Upk1aQ9D132 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1aQ9D132 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Gm13813-201ENSMUST00000120998 787 ntBASIC12.23□□□□□ -0.45
Upk1aQ9D132 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Gm7063-201ENSMUST00000186840 981 ntBASIC12.23□□□□□ -0.45
Upk1aQ9D132 Gm5279-201ENSMUST00000199575 745 ntBASIC12.23□□□□□ -0.45
Upk1aQ9D132 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.23□□□□□ -0.45
Upk1aQ9D132 Gm26315-201ENSMUST00000083890 321 ntBASIC12.23□□□□□ -0.45
Upk1aQ9D132 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.23□□□□□ -0.45
Upk1aQ9D132 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.23□□□□□ -0.45
Upk1aQ9D132 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Gm11524-201ENSMUST00000119349 807 ntBASIC12.22□□□□□ -0.45
Upk1aQ9D132 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Gm27838-201ENSMUST00000184829 128 ntBASIC12.22□□□□□ -0.45
Upk1aQ9D132 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Gm9797-201ENSMUST00000052902 613 ntBASIC12.22□□□□□ -0.45
Upk1aQ9D132 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Gm26035-201ENSMUST00000083065 308 ntBASIC12.22□□□□□ -0.45
Upk1aQ9D132 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.22□□□□□ -0.45
Upk1aQ9D132 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.22□□□□□ -0.45
Upk1aQ9D132 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1aQ9D132 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Gm10576-201ENSMUST00000191927 825 ntBASIC12.21□□□□□ -0.45
Upk1aQ9D132 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.21□□□□□ -0.45
Upk1aQ9D132 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms