Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Mir7684-201ENSMUST00000183858 60 ntBASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Gm38223-201ENSMUST00000194484 695 ntBASIC13.31□□□□□ -0.28
Snf8Q9CZ28 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Gm11978-201ENSMUST00000122315 466 ntBASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Gm15487-201ENSMUST00000122373 465 ntBASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Gm27838-201ENSMUST00000184829 128 ntBASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.3□□□□□ -0.28
Snf8Q9CZ28 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Gm28760-201ENSMUST00000185995 736 ntBASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Gm20949-201ENSMUST00000206478 952 ntBASIC13.29□□□□□ -0.28
Snf8Q9CZ28 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms