Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 AC133598.4-201ENSMUST00000224577 454 ntBASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retreg3Q9CQV4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm14603-201ENSMUST00000121275 448 ntBASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm9499-201ENSMUST00000180888 964 ntBASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm8652-201ENSMUST00000181363 964 ntBASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm19253-201ENSMUST00000204279 307 ntBASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm10012-201ENSMUST00000078252 192 ntBASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retreg3Q9CQV4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Gm11814-201ENSMUST00000119515 929 ntBASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Gm11803-201ENSMUST00000119966 444 ntBASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Gm11510-201ENSMUST00000120278 347 ntBASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Gm11978-201ENSMUST00000122315 466 ntBASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Gm27839-201ENSMUST00000184242 106 ntBASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Gm45784-201ENSMUST00000188360 142 ntBASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Gm44069-201ENSMUST00000204898 506 ntBASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Gm45331-201ENSMUST00000209868 554 ntBASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Retreg3Q9CQV4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms