Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Raf1Q99N57 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.65□□□□□ -0.54
Raf1Q99N57 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.65□□□□□ -0.54
Raf1Q99N57 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.65□□□□□ -0.54
Raf1Q99N57 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.65□□□□□ -0.54
Raf1Q99N57 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.65□□□□□ -0.54
Raf1Q99N57 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.65□□□□□ -0.54
Raf1Q99N57 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.65□□□□□ -0.54
Raf1Q99N57 Gm17330-201ENSMUST00000221047 165 ntBASIC11.65□□□□□ -0.54
Raf1Q99N57 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Raf1Q99N57 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Raf1Q99N57 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Raf1Q99N57 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Raf1Q99N57 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Raf1Q99N57 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Raf1Q99N57 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
Raf1Q99N57 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.64□□□□□ -0.55
Raf1Q99N57 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Raf1Q99N57 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Raf1Q99N57 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.64□□□□□ -0.55
Raf1Q99N57 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.64□□□□□ -0.55
Raf1Q99N57 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Raf1Q99N57 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.64□□□□□ -0.55
Raf1Q99N57 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Raf1Q99N57 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.64□□□□□ -0.55
Raf1Q99N57 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Raf1Q99N57 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Raf1Q99N57 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Raf1Q99N57 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Raf1Q99N57 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.63□□□□□ -0.55
Raf1Q99N57 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Raf1Q99N57 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Raf1Q99N57 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Raf1Q99N57 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Raf1Q99N57 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms