Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Mir181d-201ENSMUST00000102383 72 ntBASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Gm11637-201ENSMUST00000120601 592 ntBASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Gm26185-201ENSMUST00000157692 266 ntBASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Gm19091-201ENSMUST00000208120 978 ntBASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Gm9111-201ENSMUST00000219394 709 ntBASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col25a1Q99MQ5 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Gm2445-201ENSMUST00000182798 989 ntBASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms