Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.36□□□□□ -0.59
Scrt1Q99M85 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.35□□□□□ -0.59
Scrt1Q99M85 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Gm45186-201ENSMUST00000206874 478 ntBASIC11.35□□□□□ -0.59
Scrt1Q99M85 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.35□□□□□ -0.59
Scrt1Q99M85 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Gm16372-201ENSMUST00000073088 450 ntBASIC11.35□□□□□ -0.59
Scrt1Q99M85 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scrt1Q99M85 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.35□□□□□ -0.59
Scrt1Q99M85 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.34□□□□□ -0.59
Scrt1Q99M85 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Gm13461-201ENSMUST00000120980 662 ntBASIC11.34□□□□□ -0.59
Scrt1Q99M85 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.34□□□□□ -0.59
Scrt1Q99M85 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms