Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Gm44397-201ENSMUST00000195950 113 ntBASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp1b1Q99LU0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp1b1Q99LU0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Itm2b-204ENSMUST00000228637 783 ntBASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms