Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Gm2495-201ENSMUST00000191160 466 ntBASIC12.5□□□□□ -0.41
Cstf3Q99LI7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.5□□□□□ -0.41
Cstf3Q99LI7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cstf3Q99LI7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cstf3Q99LI7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms