Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lysmd3Q99LE3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd3Q99LE3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lysmd3Q99LE3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd3Q99LE3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd3Q99LE3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd3Q99LE3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd3Q99LE3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd3Q99LE3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Snord83b-201ENSMUST00000104546 94 ntBASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Gm15198-201ENSMUST00000117283 177 ntBASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Gm11793-201ENSMUST00000120433 981 ntBASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lysmd3Q99LE3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lysmd3Q99LE3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms