Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rfc4Q99J62 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfc4Q99J62 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.87□□□□□ -0.03
Rfc4Q99J62 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Rfc4Q99J62 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.86□□□□□ -0.03
Rfc4Q99J62 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Gm23363-201ENSMUST00000175024 79 ntBASIC14.86□□□□□ -0.03
Rfc4Q99J62 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.86□□□□□ -0.03
Rfc4Q99J62 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.86□□□□□ -0.03
Rfc4Q99J62 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.86□□□□□ -0.03
Rfc4Q99J62 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfc4Q99J62 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rfc4Q99J62 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Gm14208-201ENSMUST00000119645 678 ntBASIC14.85□□□□□ -0.03
Rfc4Q99J62 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.85□□□□□ -0.03
Rfc4Q99J62 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.85□□□□□ -0.03
Rfc4Q99J62 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Gm44262-201ENSMUST00000204969 372 ntBASIC14.85□□□□□ -0.03
Rfc4Q99J62 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.85□□□□□ -0.03
Rfc4Q99J62 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.85□□□□□ -0.03
Rfc4Q99J62 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Grk6-205ENSMUST00000224653 2976 ntBASIC14.85□□□□□ -0.03
Rfc4Q99J62 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc4Q99J62 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.84□□□□□ -0.03
Rfc4Q99J62 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.84□□□□□ -0.03
Rfc4Q99J62 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Gm28450-201ENSMUST00000187349 638 ntBASIC14.84□□□□□ -0.03
Rfc4Q99J62 Gm38092-201ENSMUST00000195600 653 ntBASIC14.84□□□□□ -0.03
Rfc4Q99J62 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.84□□□□□ -0.03
Rfc4Q99J62 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.84□□□□□ -0.03
Rfc4Q99J62 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.84□□□□□ -0.03
Rfc4Q99J62 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.84□□□□□ -0.03
Rfc4Q99J62 Gm8385-201ENSMUST00000058999 643 ntBASIC14.84□□□□□ -0.03
Rfc4Q99J62 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms