Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Gm25857-201ENSMUST00000082788 129 ntBASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha9Q91Y11 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Gm18062-201ENSMUST00000208020 547 ntBASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Gm18055-201ENSMUST00000208254 547 ntBASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Snora73a-201ENSMUST00000082453 205 ntBASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha9Q91Y11 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdha9Q91Y11 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha9Q91Y11 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha9Q91Y11 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha9Q91Y11 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha9Q91Y11 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pcdha9Q91Y11 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha9Q91Y11 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdha9Q91Y11 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha9Q91Y11 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha9Q91Y11 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.7□□□□□ -0.22
Pcdha9Q91Y11 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha9Q91Y11 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha9Q91Y11 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha9Q91Y11 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms