Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb22Q91XZ8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb22Q91XZ8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb22Q91XZ8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb22Q91XZ8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb22Q91XZ8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb22Q91XZ8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb22Q91XZ8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb22Q91XZ8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb22Q91XZ8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb22Q91XZ8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb22Q91XZ8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb22Q91XZ8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.08■□□□□ 0.01
Pcdhb22Q91XZ8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb22Q91XZ8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb22Q91XZ8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb22Q91XZ8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Pcdhb22Q91XZ8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb22Q91XZ8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb22Q91XZ8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb22Q91XZ8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Gm27514-201ENSMUST00000183692 110 ntBASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb22Q91XZ8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Gm25261-201ENSMUST00000157416 134 ntBASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Gm25927-201ENSMUST00000175058 117 ntBASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Gm20614-201ENSMUST00000177106 632 ntBASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb22Q91XZ8 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.06■□□□□ 0
Pcdhb22Q91XZ8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdhb22Q91XZ8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb22Q91XZ8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb22Q91XZ8 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.06■□□□□ 0
Pcdhb22Q91XZ8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb22Q91XZ8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pcdhb22Q91XZ8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Pcdhb22Q91XZ8 Gm11591-201ENSMUST00000120063 702 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms