Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Gm7730-201ENSMUST00000212486 454 ntBASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Zmym2-202ENSMUST00000223669 1281 ntBASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb3Q91XZ7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Gm22709-201ENSMUST00000116893 111 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Gm19212-201ENSMUST00000216642 862 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Gm46209-201ENSMUST00000217912 553 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 CT025552.1-201ENSMUST00000224561 521 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Syt7-204ENSMUST00000223586 1344 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb3Q91XZ7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms